Shoutik Mukherjee
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Shoutik Mukherjee

Publications and Presentations

In Press

  1. S. Mukherjee and B. Babadi. 2024. Adaptive Modeling and Inference of Higher-Order Coordination in Neuronal Assemblies: a Dynamic Greedy Approach, PLoS Comp. Biol., 20(5).

  1. K. M. O'Neill, E. D. Anderson*, S. Mukherjee* , S. Gandu*, S. A. McEwan, A. Omelchenko, A. R. Rodriguez, W. Losert, D. F. Meaney, B. Babadi, and B. L. Firestein. 2023. Time-dependent homeostatic mechanisms underlie Brain-Derived Neurotrophic Factor action on neural circuitry, Commun. Biol., 6(1).

  1. L. Koçillari, M. Celotto, N. A. Francis, S. Mukherjee , B. Babadi, P. O. Kanold, and S. Panzeri. 2023. Behavioural relevance of redundant and synergistic stimulus information between functionally connected neurons in mouse auditory cortex, Brain Informatics, 10(34).

  1. N. A. Francis*, S. Mukherjee* , L. Koçillari*, S. Panzeri, B. Babadi, P. O. Kanold. 2022. Sequential Transmission of Task-Relevant Information in Cortical Neuronal Networks, Cell Reports 39(9).

  1. S. A. Shamma, P. Patel, S. Mukherjee, G. Marion, B. Khalighinejad, C. Han, J. Herrero, S. Bickel, A. Mehta, N. Mesgarani. 2021. Learning Speech Production and Perception through Sensorimotor Interactions, Cerebral Cortex Communications 2(1).

Conference Papers

  1. S. Mukherjee, P. Jendrichovsky, P. O. Kanold, and B. Babadi. Reinforcement Learning-Guided Ontogenetic Stimulation Policies for Robust Functional Network Discovery, Proceedings of the 2024 IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP 2024), Seoul, Korea, April 14-19.

  1. L. Koçillari, M. Celotto, N. A. Francis, S. Mukherjee , B. Babadi, P. O. Kanold, and S. Panzeri. 2023. Measuring stimulus-related redundant and synergistic functional connectivity with single cell resolution in auditory cortex, Proceedings of the 16th International Conference on Brain Informatics, Aug. 1-3.

  1. S. Mukherjee and B. Babadi, Dynamic Analysis of Higher-Order Coordination in Neuronal Assemblies via De-Sparsified Orthogonal Matching Pursuit, Advances in Neural Information Processing Systems 34 (NeurIPS 2021), Dec. 6-14.

  1. A. Rupasinghe, S. Mukherjee, and B. Babadi, Adaptive Frequency-domain Granger Causal Inference from Neuronal Ensemble Data, Proceedings of the 2020 Asilomar Conference on Signals, Systems, and Computers, Nov. 1-4, Pacific Grove, CA.

  1. S. Mukherjee and B. Babadi, A Statistical Approach to Dynamic Synchrony Analysis of Neuronal Ensemble Spiking, Proceedings of the 2019 Asilomar Conference on Signals, Systems, and Computers, Nov. 3-6, Pacific Grove, CA.

Posters/Abstracts

  1. S. Mukherjee, B. Babadi, and S. Shamma, Sparse High-Dimensional Decomposition of Non-Primary Cortical Spectrotemporal Receptive Fields, 50th Annual Neuroscience Meeting (SfN 2021), Nov. 8—11.

  1. S. Mukherjee, K. M. O'Neill, B. L. Firestein, W. Losert, and B. Babadi, A Statistical Approach to the Dynamic Analysis of Synchronous Spiking in Neuronal Ensembles, 49th Annual Neuroscience Meeting (SfN 2019), Oct. 19—23, Chicago, IL